Basic Information
Locus ID:
Lb6G30666
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
WD repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 133155368 | 133156292 | - | Lb6G30666 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.87 | 19,785.07 Da | 51.51 | 85.61 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 14 | 143 | 3.0E-17 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 14 | 143 | 3.0E-17 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 3 | 179 | 1.7E-20 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 3 | 179 | 1.7E-20 | IPR015943 |
| SMART | SM00320 | WD40_4 | 95 | 135 | 0.53 | IPR001680 |
| SMART | SM00320 | WD40_4 | 6 | 44 | 0.0048 | IPR001680 |
| SMART | SM00320 | WD40_4 | 6 | 44 | 0.0048 | IPR001680 |
| SMART | SM00320 | WD40_4 | 95 | 135 | 0.53 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12910.1 | Transducin/WD40 repeat-like superfamily protein. Encodes a protein with similarity to the petunia WD repeat protein an11. | 0 |
| RefSeq | XP_008353359.1 | WD repeat-containing protein LWD1 [Malus domestica] | 0 |
| Q9LPV9 | WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5PPQ9 | WD_REPEATS_REGION domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_156000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology