Basic Information
Locus ID:
Lb6G30633
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 126980284 | 126982673 | + | Lb6G30633 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 51,144.44 Da | 45.17 | 67.79 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 100 | 247 | 1.7E-19 | IPR003441 |
| Pfam | PF02365 | No apical meristem (NAM) protein | 100 | 247 | 1.7E-19 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 95 | 266 | 7.85E-34 | IPR036093 |
| SUPERFAMILY | SSF101941 | NAC domain | 95 | 266 | 7.85E-34 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 111 | 271 | 8.6E-28 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 111 | 271 | 8.6E-28 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 99 | 266 | 27.698526 | IPR003441 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 99 | 266 | 27.698526 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_010686990.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A061EC79 | NAC domain transcriptional regulator superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_016984 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology