Basic Information
Locus ID:
Lb6G30552
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 101142358 | 101149532 | + | Lb6G30552 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 203,340.97 Da | 46.80 | 79.44 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 359 | 631 | 1.93071E-127 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1499 | 1762 | 1.85204E-142 | IPR044769 |
| CDD | cd17300 | PIPKc_PIKfyve | 1499 | 1762 | 1.85204E-142 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 359 | 631 | 1.93071E-127 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1538 | 1704 | 9.7E-32 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 383 | 627 | 9.8E-31 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1538 | 1704 | 9.7E-32 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 383 | 627 | 9.8E-31 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1491 | 1762 | 2.75E-76 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 425 | 597 | 3.92E-41 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1491 | 1762 | 2.75E-76 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 425 | 597 | 3.92E-41 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1622 | 1763 | 4.0E-40 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 424 | 597 | 1.5E-52 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1447 | 1619 | 3.8E-33 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 424 | 597 | 1.5E-52 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1447 | 1619 | 3.8E-33 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1622 | 1763 | 4.0E-40 | - |
| SMART | SM00330 | PIPK_2 | 1476 | 1763 | 2.2E-121 | IPR002498 |
| SMART | SM00330 | PIPK_2 | 1476 | 1763 | 2.2E-121 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1441 | 1762 | 54.61298 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1441 | 1762 | 54.61298 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1189 | 1206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1189 | 1206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1185 | 1206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1185 | 1206 | - | - |
| Coils | Coil | Coil | 1140 | 1160 | - | - |
| Coils | Coil | Coil | 1140 | 1160 | - | - |
| Coils | Coil | Coil | 1068 | 1088 | - | - |
| Coils | Coil | Coil | 1068 | 1088 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_010654372.1 | PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Vitis vinifera] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T1REB8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Carya illinoinensis OX=32201 GN=CIPAW_02G131400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology