Basic Information
Locus ID:
Lb6G30208
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
NAC domain-containing protein 8 isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 55724578 | 55728041 | - | Lb6G30208 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 52,241.83 Da | 45.39 | 73.92 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 224 | 1.4E-17 | IPR003441 |
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 224 | 1.4E-17 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 46 | 129 | 1.01E-12 | IPR036093 |
| SUPERFAMILY | SSF101941 | NAC domain | 142 | 243 | 3.01E-20 | IPR036093 |
| SUPERFAMILY | SSF101941 | NAC domain | 46 | 129 | 1.01E-12 | IPR036093 |
| SUPERFAMILY | SSF101941 | NAC domain | 142 | 243 | 3.01E-20 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 248 | 2.5E-27 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 248 | 2.5E-27 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 243 | 28.130638 | IPR003441 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 243 | 28.130638 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_028087921.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like isoform X1 [Camellia sinensis] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B6YWB3 | Putative NAC domain-containing protein 8 isoform X1 OS=Davidia involucrata OX=16924 GN=Din_005532 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology