Basic Information
Locus ID:
Lb6G30178
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 53281450 | 53288022 | - | Lb6G30178 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.06 | 85,649.02 Da | 31.88 | 95.35 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 611 | 782 | 1.5E-34 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 611 | 782 | 1.5E-34 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 586 | 786 | 9.98E-59 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 586 | 786 | 9.98E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 386 | 1.13E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 386 | 1.13E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 167 | 265 | 1.5E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 167 | 265 | 1.5E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 584 | 685 | 4.6E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 686 | 787 | 9.3E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 13 | 166 | 1.4E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 413 | 4.6E-16 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 584 | 685 | 4.6E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 686 | 787 | 9.3E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 13 | 166 | 1.4E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 413 | 4.6E-16 | IPR032675 |
| SMART | SM00220 | serkin_6 | 610 | 787 | 1.1E-9 | IPR000719 |
| SMART | SM00220 | serkin_6 | 610 | 787 | 1.1E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 610 | 787 | 32.145676 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 610 | 787 | 32.145676 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 616 | 638 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 616 | 638 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 730 | 742 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 730 | 742 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031103067.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Ipomoea triloba] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S4A9Y9 | probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Nicotiana tabacum OX=4097 GN=LOC107795352 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology