HalophFGD

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Basic Information
Locus ID: Lb6G30159
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: Zinc knuckle
Maps and Mapping Data
Chromosome Start End Strand ID
chr06 51495787 51496979 - Lb6G30159
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.22 39,831.28 Da 46.63 84.05 -0.07
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF14111 Domain of unknown function (DUF4283) 15 133 1.5E-19 IPR025558
Pfam PF14111 Domain of unknown function (DUF4283) 15 133 1.5E-19 IPR025558
MobiDBLite mobidb-lite consensus disorder prediction 304 330 - -
MobiDBLite mobidb-lite consensus disorder prediction 304 330 - -
MobiDBLite mobidb-lite consensus disorder prediction 299 330 - -
MobiDBLite mobidb-lite consensus disorder prediction 299 330 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_026425214.1 uncharacterized protein LOC113321518 isoform X2 [Papaver somniferum] 0
TrEMBL A0A6P6WTP1 uncharacterized protein LOC113735973 OS=Coffea arabica OX=13443 GN=LOC113735973 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-2734
Plumbaginaceae Limonium bicolor 90 Lb0G36861, Lb0G36915, Lb0G37393, Lb0G37441, Lb0G37645 ...
Lb0G37943, Lb0G38106, Lb0G38123, Lb1G00247, Lb1G01449, Lb1G01710, Lb1G01806, Lb1G01860, Lb1G02159, Lb1G02317, Lb1G02384, Lb1G05943, Lb1G06245, Lb2G08303, Lb2G08431, Lb2G08930, Lb2G08938, Lb2G08972, Lb2G09582, Lb2G09600, Lb2G09662, Lb2G09670, Lb2G09672, Lb2G09898, Lb2G10709, Lb2G11736, Lb2G11738, Lb2G11978, Lb2G12177, Lb2G12223, Lb2G12325, Lb2G12798, Lb2G12820, Lb2G13243, Lb2G13279, Lb2G13810, Lb2G14137, Lb2G14314, Lb2G15092, Lb3G16104, Lb3G16150, Lb3G17709, Lb3G17719, Lb3G18507, Lb3G18527, Lb3G18899, Lb3G19608, Lb3G20088, Lb3G20791, Lb3G20948, Lb3G21267, Lb3G21394, Lb4G21555, Lb4G21796, Lb4G22022, Lb4G22264, Lb4G22658, Lb4G22755, Lb4G22758, Lb4G23752, Lb4G24009, Lb4G24443, Lb4G24452, Lb4G24647, Lb4G25049, Lb4G25361, Lb4G25656, Lb4G25797, Lb4G26332, Lb5G26690, Lb5G27630, Lb5G28672, Lb6G30159, Lb6G30724, Lb6G31187, Lb6G31394, Lb7G33042, Lb7G33045, Lb7G33400, Lb7G33966, Lb7G35179, Lb7G35191, Lb7G35522, Lb8G35809, Lb8G36652
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.