Basic Information
Locus ID:
Lb6G29687
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
ABC transporter B family member
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 7800886 | 7805686 | - | Lb6G29687 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 17,946.23 Da | 29.70 | 93.95 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 2 | 97 | 2.09E-13 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 2 | 97 | 2.09E-13 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 1 | 160 | 1.8E-14 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 1 | 160 | 1.8E-14 | IPR036640 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 1 | 84 | 13.35163 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 1 | 84 | 13.35163 | IPR011527 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G25450.3 | non-intrinsic ABC protein 8. member of NAP subfamily | 0 |
| RefSeq | XP_021730155.1 | ABC transporter B family member 28-like isoform X3 [Chenopodium quinoa] | 0 |
| Q8LPQ6 | ABC transporter B family member 28 OS=Arabidopsis thaliana OX=3702 GN=ABCB28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M0J4 | ABC transporter B family member 28 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||