Basic Information
Locus ID:
Lb5G29329
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 253033694 | 253036914 | - | Lb5G29329 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 88,576.53 Da | 32.34 | 96.24 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 256 | 278 | 0.5 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 503 | 790 | 1.7E-44 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 256 | 278 | 0.5 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 52 | 72 | 0.4 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 52 | 72 | 0.4 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 503 | 790 | 1.7E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 482 | 793 | 2.56E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 241 | 9.35E-55 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 172 | 421 | 2.99E-43 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 241 | 9.35E-55 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 172 | 421 | 2.99E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 482 | 793 | 2.56E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 588 | 802 | 1.9E-59 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 588 | 802 | 1.9E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 145 | 1.2E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 466 | 587 | 1.2E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 145 | 1.2E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 466 | 587 | 1.2E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 429 | 5.3E-74 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 39 | 3.1E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 39 | 3.1E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 429 | 5.3E-74 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 302 | 326 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 50 | 74 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1 | 25 | 65.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 501 | 801 | 5.2E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 73.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 501 | 801 | 5.2E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 50 | 74 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 302 | 326 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1 | 25 | 65.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 501 | 804 | 36.527214 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 501 | 804 | 36.527214 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 631 | 643 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 631 | 643 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_015870432.2 | leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Ziziphus jujuba var. spinosa] | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | A0A067GBX9 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g012213mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology