Basic Information
Locus ID:
Lb5G29219
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
serine threonine-protein kinase HT1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 237985323 | 237991886 | + | Lb5G29219 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 34,567.83 Da | 44.65 | 76.96 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 31 | 280 | 4.91428E-102 | - |
| CDD | cd13999 | STKc_MAP3K-like | 31 | 280 | 4.91428E-102 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 46 | 279 | 2.8E-56 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 46 | 279 | 2.8E-56 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 47 | 280 | 1.35E-66 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 47 | 280 | 1.35E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 106 | 293 | 1.7E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 26 | 88 | 1.6E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 106 | 293 | 1.7E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 26 | 88 | 1.6E-6 | - |
| SMART | SM00220 | serkin_6 | 6 | 283 | 1.0E-41 | IPR000719 |
| SMART | SM00220 | serkin_6 | 6 | 283 | 1.0E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 283 | 35.509567 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 283 | 35.509567 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 147 | 159 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 147 | 159 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 103 | 116 | 4.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 141 | 159 | 4.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 251 | 273 | 4.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 207 | 229 | 4.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 251 | 273 | 4.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 207 | 229 | 4.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 141 | 159 | 4.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 103 | 116 | 4.2E-15 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020552982.1 | serine/threonine-protein kinase HT1 [Sesamum indicum] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TUL8 | serine/threonine-protein kinase HT1 OS=Sesamum indicum OX=4182 GN=LOC105171315 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology