Basic Information
Locus ID:
Lb5G29127
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
hsp90
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 229052027 | 229054437 | + | Lb5G29127 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 13,889.33 Da | 43.71 | 70.00 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 1 | 60 | 1.23E-16 | IPR036890 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 1 | 60 | 1.23E-16 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 1 | 113 | 5.9E-20 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 1 | 113 | 5.9E-20 | IPR036890 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 9 | 26 | 3.6E-18 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 34 | 56 | 3.6E-18 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 9 | 26 | 3.6E-18 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 34 | 56 | 3.6E-18 | IPR020575 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 103 | - | - |
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56000.1 | HEAT SHOCK PROTEIN 81.4. | 0 |
| RefSeq | XP_008379026.2 | heat shock protein 90-2-like [Malus domestica] | 0 |
| P55737 | Heat shock protein 90-2 OS=Arabidopsis thaliana OX=3702 GN=HSP90-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6D2I9F3 | HATPase_c domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS9185 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology