Basic Information
Locus ID:
Lb5G29098
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 227087531 | 227104190 | - | Lb5G29098 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 66,744.03 Da | 40.19 | 90.00 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 322 | 575 | 3.64825E-86 | - |
| CDD | cd14066 | STKc_IRAK | 322 | 575 | 3.64825E-86 | - |
| Pfam | PF01476 | LysM domain | 102 | 138 | 0.012 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 318 | 576 | 4.8E-45 | IPR001245 |
| Pfam | PF01476 | LysM domain | 102 | 138 | 0.012 | IPR018392 |
| Pfam | PF01476 | LysM domain | 47 | 84 | 0.017 | IPR018392 |
| Pfam | PF01476 | LysM domain | 47 | 84 | 0.017 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 318 | 576 | 4.8E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 299 | 579 | 1.89E-74 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 299 | 579 | 1.89E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 387 | 600 | 1.4E-54 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 387 | 600 | 1.4E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 288 | 386 | 1.1E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 288 | 386 | 1.1E-26 | - |
| SMART | SM00220 | serkin_6 | 316 | 582 | 6.4E-37 | IPR000719 |
| SMART | SM00220 | serkin_6 | 316 | 582 | 6.4E-37 | IPR000719 |
| SMART | SM00257 | LysM_2 | 101 | 147 | 1.6 | IPR018392 |
| SMART | SM00257 | LysM_2 | 39 | 84 | 0.56 | IPR018392 |
| SMART | SM00257 | LysM_2 | 101 | 147 | 1.6 | IPR018392 |
| SMART | SM00257 | LysM_2 | 39 | 84 | 0.56 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 316 | 597 | 38.392902 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 316 | 597 | 38.392902 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 431 | 443 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 322 | 344 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 322 | 344 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 431 | 443 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_030539681.1 | lysM domain receptor-like kinase 3 isoform X2 [Rhodamnia argentea] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7BUP3 | Putative chitin elicitor receptor kinase 1-like OS=Davidia involucrata OX=16924 GN=Din_041639 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology