Basic Information
Locus ID:
Lb5G28975
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 216544357 | 216547995 | - | Lb5G28975 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 75,894.03 Da | 46.43 | 92.96 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 6.3E-9 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 6.3E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 413 | 680 | 6.3E-33 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 113 | 173 | 5.6E-11 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 413 | 680 | 6.3E-33 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 113 | 173 | 5.6E-11 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 230 | 7.18E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 391 | 680 | 1.37E-59 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 391 | 680 | 1.37E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 230 | 7.18E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 373 | 487 | 6.3E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 245 | 1.7E-47 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 489 | 694 | 7.3E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 373 | 487 | 6.3E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 489 | 694 | 7.3E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 245 | 1.7E-47 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 90 | 114 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 136 | 159 | 4.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 136 | 159 | 4.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 90 | 114 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 207 | 230 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 207 | 230 | 400.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 411 | 683 | 29.742895 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 411 | 683 | 29.742895 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 276 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_021761852.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like [Chenopodium quinoa] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M9M6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology