Basic Information
Locus ID:
Lb5G28748
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
DRM2
Description:
DNA (cytosine-5-)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 203891548 | 203900980 | - | Lb5G28748 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 67,233.39 Da | 43.15 | 82.27 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 472 | 586 | 9.2E-11 | IPR001525 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 472 | 586 | 9.2E-11 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 469 | 589 | 5.42E-18 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 469 | 589 | 5.42E-18 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 278 | 468 | 3.6E-22 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 278 | 468 | 3.6E-22 | IPR029063 |
| Gene3D | G3DSA:1.10.8.10 | - | 42 | 97 | 3.7E-5 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 242 | 365 | 8.6E-7 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 468 | 596 | 3.6E-29 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 242 | 365 | 8.6E-7 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 468 | 596 | 3.6E-29 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 42 | 97 | 3.7E-5 | - |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 471 | 596 | 21.128927 | IPR001525 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 471 | 596 | 21.128927 | IPR001525 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 266 | 595 | 126.357147 | IPR030380 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 266 | 595 | 126.357147 | IPR030380 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 25 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_021766180.1 | DNA (cytosine-5)-methyltransferase DRM2-like [Chenopodium quinoa] | 0 |
| Q9M548 | DNA (cytosine-5)-methyltransferase DRM2 OS=Arabidopsis thaliana OX=3702 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N133 | SAM-dependent MTase DRM-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology