Basic Information
Locus ID:
Lb5G28606
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 196733866 | 196739329 | + | Lb5G28606 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 66,648.32 Da | 45.66 | 71.74 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 8 | 244 | 2.73475E-119 | - |
| CDD | cd08215 | STKc_Nek | 8 | 244 | 2.73475E-119 | - |
| Pfam | PF00069 | Protein kinase domain | 9 | 212 | 2.2E-56 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 9 | 212 | 2.2E-56 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 268 | 2.56E-72 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 268 | 2.56E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 89 | 263 | 2.5E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 88 | 7.4E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 88 | 7.4E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 89 | 263 | 2.5E-46 | - |
| SMART | SM00220 | serkin_6 | 9 | 265 | 1.8E-67 | IPR000719 |
| SMART | SM00220 | serkin_6 | 9 | 265 | 1.8E-67 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 9 | 266 | 39.170273 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 9 | 266 | 39.170273 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 15 | 38 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 130 | 142 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 130 | 142 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 15 | 38 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 323 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44200.1 | NIMA (never in mitosis, gene A)-related 6. Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules. | 0 |
| RefSeq | XP_010651645.1 | PREDICTED: serine/threonine-protein kinase Nek5 [Vitis vinifera] | 0 |
| Q0WPH8 | Serine/threonine-protein kinase Nek5 OS=Arabidopsis thaliana OX=3702 GN=NEK5 PE=1 SV=1 | 0 | |
| TrEMBL | F6HAB5 | Protein kinase domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_06s0009g00690 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology