Basic Information
Locus ID:
Lb5G28015
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Cytochrome p450
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 173211590 | 173214673 | + | Lb5G28015 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 42,817.16 Da | 36.32 | 90.60 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00067 | Cytochrome P450 | 180 | 363 | 1.0E-19 | IPR001128 |
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 14 | 96 | 2.3E-12 | IPR004252 |
| Pfam | PF00067 | Cytochrome P450 | 180 | 363 | 1.0E-19 | IPR001128 |
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 14 | 96 | 2.3E-12 | IPR004252 |
| SUPERFAMILY | SSF48264 | Cytochrome P450 | 179 | 366 | 4.58E-29 | IPR036396 |
| SUPERFAMILY | SSF48264 | Cytochrome P450 | 179 | 366 | 4.58E-29 | IPR036396 |
| Gene3D | G3DSA:1.10.630.10 | Cytochrome P450 | 175 | 378 | 5.3E-32 | IPR036396 |
| Gene3D | G3DSA:1.10.630.10 | Cytochrome P450 | 175 | 378 | 5.3E-32 | IPR036396 |
| PRINTS | PR00463 | E-class P450 group I signature | 235 | 256 | 2.8E-11 | IPR002401 |
| PRINTS | PR00463 | E-class P450 group I signature | 211 | 230 | 2.8E-11 | IPR002401 |
| PRINTS | PR00463 | E-class P450 group I signature | 334 | 352 | 2.8E-11 | IPR002401 |
| PRINTS | PR00463 | E-class P450 group I signature | 211 | 230 | 2.8E-11 | IPR002401 |
| PRINTS | PR00463 | E-class P450 group I signature | 334 | 352 | 2.8E-11 | IPR002401 |
| PRINTS | PR00463 | E-class P450 group I signature | 235 | 256 | 2.8E-11 | IPR002401 |
Gene Ontology
KEGG Pathway
Pathway:
Reaction:
R02211 (Progesterone + [Reduced NADPH---hemoprotein reductase] + Oxygen <=> 17alpha-Hydroxyprogesterone + [Oxidized NADPH---hemoprotein reductase] + H2O)
R03783 (Pregnenolone + [Reduced NADPH---hemoprotein reductase] + Oxygen <=> 17alpha-Hydroxypregnenolone + [Oxidized NADPH---hemoprotein reductase] + H2O)
R04852 (21-Deoxycortisol + [Oxidized NADPH---hemoprotein reductase] + H2O <=> 11beta-Hydroxyprogesterone + [Reduced NADPH---hemoprotein reductase] + Oxygen)
R04853 (20alpha-Hydroxycholesterol + [Reduced NADPH---hemoprotein reductase] + Oxygen <=> 17alpha,20alpha-Dihydroxycholesterol + [Oxidized NADPH---hemoprotein reductase] + H2O)
R08517 (17alpha-Hydroxypregnenolone + [Reduced NADPH---hemoprotein reductase] + Oxygen <=> Dehydroepiandrosterone + Acetate + [Oxidized NADPH---hemoprotein reductase] + H2O)
R08518 (17alpha-Hydroxyprogesterone + [Reduced NADPH---hemoprotein reductase] + Oxygen <=> Androstenedione + Acetate + [Oxidized NADPH---hemoprotein reductase] + H2O)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G37310.1 | cytochrome P450, family 81, subfamily H, polypeptide 1. member of CYP81H | 0 |
| RefSeq | XP_027923396.1 | cytochrome P450 82A4-like [Vigna unguiculata] | 0 |
| P0DO85 | Strychnine-10-hydroxylase OS=Strychnos nux-vomica OX=28545 GN=10H PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QRQ8 | Cytochrome P450 OS=Carpinus fangiana OX=176857 GN=FH972_005448 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||