Basic Information
Locus ID:
Lb5G27843
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Brca1-associated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 164525742 | 164530423 | + | Lb5G27843 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 35,204.30 Da | 35.57 | 92.45 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16457 | RING-H2_BRAP2 | 106 | 138 | 1.23616E-14 | - |
| CDD | cd16457 | RING-H2_BRAP2 | 106 | 138 | 1.23616E-14 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 108 | 140 | 2.74E-5 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 108 | 140 | 2.74E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 90 | 144 | 7.9E-6 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 90 | 144 | 7.9E-6 | IPR013083 |
| Coils | Coil | Coil | 242 | 281 | - | - |
| Coils | Coil | Coil | 242 | 281 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26000.2 | zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_034698836.1 | BRAP2 RING ZnF UBP domain-containing protein 2 [Vitis riparia] | 0 |
| O80996 | BRAP2 RING ZnF UBP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BRIZ2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A392MHJ6 | Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0007836 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||