HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Lb5G27752
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: Ribonuclease H protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr05 161194277 161195063 - Lb5G27752
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.77 16,564.81 Da 45.45 73.61 -0.38
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF14392 Zinc knuckle 59 81 2.7E-6 IPR025836
Pfam PF14392 Zinc knuckle 59 81 2.7E-6 IPR025836
MobiDBLite mobidb-lite consensus disorder prediction 128 147 - -
MobiDBLite mobidb-lite consensus disorder prediction 128 147 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_052288742.1 uncharacterized protein LOC127899409 [Citrus sinensis] 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plumbaginaceae Limonium bicolor 55 Lb0G38197, Lb1G01709, Lb1G01841, Lb1G02283, Lb1G02359 ...
Lb1G02764, Lb1G02843, Lb1G03334, Lb1G03418, Lb1G03543, Lb1G04968, Lb1G05186, Lb1G05368, Lb1G06390, Lb1G06591, Lb1G06785, Lb1G06990, Lb1G07023, Lb1G07668, Lb2G08277, Lb2G08394, Lb2G08395, Lb2G08480, Lb2G08639, Lb2G09040, Lb2G09057, Lb2G09241, Lb2G09259, Lb2G11236, Lb2G12266, Lb2G12816, Lb2G12830, Lb2G13184, Lb3G15553, Lb3G15559, Lb3G15657, Lb3G16178, Lb3G17601, Lb3G17833, Lb3G21448, Lb4G22062, Lb4G22956, Lb4G24585, Lb4G24970, Lb4G25729, Lb4G26167, Lb4G26274, Lb5G27421, Lb5G27752, Lb5G28912, Lb5G29132, Lb5G29299, Lb6G30744, Lb8G35871, Lb8G35884
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.