Basic Information
Locus ID:
Lb5G27535
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 151748160 | 151759607 | + | Lb5G27535 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 141,361.41 Da | 50.88 | 66.86 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 179 | 274 | 4.38053E-40 | - |
| CDD | cd13999 | STKc_MAP3K-like | 990 | 1247 | 1.25014E-111 | - |
| CDD | cd06410 | PB1_UP2 | 179 | 274 | 4.38053E-40 | - |
| CDD | cd13999 | STKc_MAP3K-like | 990 | 1247 | 1.25014E-111 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 986 | 1247 | 1.9E-62 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 986 | 1247 | 1.9E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 192 | 274 | 7.1E-19 | IPR000270 |
| Pfam | PF00564 | PB1 domain | 192 | 274 | 7.1E-19 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 973 | 1247 | 6.79E-78 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 973 | 1247 | 6.79E-78 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 191 | 279 | 2.07E-20 | - |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 191 | 279 | 2.07E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 977 | 1071 | 7.1E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 977 | 1071 | 7.1E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1072 | 1266 | 2.3E-53 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 194 | 273 | 2.0E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1072 | 1266 | 2.3E-53 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 194 | 273 | 2.0E-10 | - |
| SMART | SM00220 | serkin_6 | 984 | 1250 | 5.6E-59 | IPR000719 |
| SMART | SM00220 | serkin_6 | 984 | 1250 | 5.6E-59 | IPR000719 |
| SMART | SM00666 | PB1_new | 190 | 276 | 4.0E-28 | IPR000270 |
| SMART | SM00666 | PB1_new | 190 | 276 | 4.0E-28 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 984 | 1249 | 41.191437 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 984 | 1249 | 41.191437 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1109 | 1121 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1109 | 1121 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 990 | 1015 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 990 | 1015 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1066 | 1079 | 2.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1103 | 1121 | 2.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1218 | 1240 | 2.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1218 | 1240 | 2.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1103 | 1121 | 2.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1174 | 1196 | 2.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1066 | 1079 | 2.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1174 | 1196 | 2.8E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 542 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 542 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 367 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_024030168.1 | uncharacterized protein LOC21401480 [Morus notabilis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P5BJY6 | Mitogen-activated protein kinase kinase kinase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_232570 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology