Basic Information
Locus ID:
Lb5G27213
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
CIPK6
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 129911061 | 129911763 | - | Lb5G27213 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.69 | 20,946.70 Da | 70.39 | 64.55 | -0.94 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 63 | 174 | 5.69992E-28 | - |
| CDD | cd12195 | CIPK_C | 63 | 174 | 5.69992E-28 | - |
| Pfam | PF03822 | NAF domain | 59 | 99 | 3.0E-12 | IPR004041 |
| Pfam | PF03822 | NAF domain | 59 | 99 | 3.0E-12 | IPR004041 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 56 | 179 | 2.9E-31 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 56 | 179 | 2.9E-31 | - |
| ProSiteProfiles | PS50816 | NAF domain profile. | 57 | 81 | 13.107116 | IPR018451 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 57 | 81 | 13.107116 | IPR018451 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 42 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30960.1 | SOS3-interacting protein 3. Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance. | 0 |
| RefSeq | XP_038699262.1 | CBL-interacting serine/threonine-protein kinase 6-like [Tripterygium wilfordii] | 0 |
| O65554 | CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CIPK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P1N697 | Protein kinase (Fragment) OS=Nothofagus pumilio OX=28950 GN=SOS2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg23780, jg38045 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000044402 |
| Apiaceae | Apium graveolens | 2 | Ag4G00083, Ag7G00826 |
| Brassicaceae | Brassica nigra | 2 | BniB02g006070.2N, BniB05g034970.2N |
| Plumbaginaceae | Limonium bicolor | 1 | Lb5G27213 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_051070, gene-QYE76_057146 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-1641, nbis-gene-1642, nbis-gene-42235 |
| Rhizophoraceae | Kandelia candel | 6 | add.evm.TU.utg000008l.472, add.evm.TU.utg000009l.222 ... |
| Salicaceae | Populus euphratica | 1 | populus_peu25291 |