Basic Information
Locus ID:
Lb5G27098
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
serine threonine-protein kinase HT1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 119854960 | 119858868 | + | Lb5G27098 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 40,841.68 Da | 51.10 | 85.35 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 70 | 315 | 1.04796E-122 | - |
| CDD | cd13999 | STKc_MAP3K-like | 70 | 315 | 1.04796E-122 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 64 | 315 | 6.5E-67 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 64 | 315 | 6.5E-67 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 52 | 315 | 1.43E-81 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 52 | 315 | 1.43E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 143 | 343 | 3.5E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 50 | 142 | 4.2E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 50 | 142 | 4.2E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 143 | 343 | 3.5E-63 | - |
| SMART | SM00220 | serkin_6 | 61 | 319 | 3.6E-61 | IPR000719 |
| SMART | SM00220 | serkin_6 | 61 | 319 | 3.6E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 61 | 329 | 42.279755 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 61 | 329 | 42.279755 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 183 | 195 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 183 | 195 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 286 | 308 | 2.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 242 | 264 | 2.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 177 | 195 | 2.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 139 | 152 | 2.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 223 | 233 | 2.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 223 | 233 | 2.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 242 | 264 | 2.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 286 | 308 | 2.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 177 | 195 | 2.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 139 | 152 | 2.3E-20 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034909209.1 | serine/threonine/tyrosine-protein kinase HT1-like [Populus alba] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5MI07 | Serine/threonine-protein kinase HT1-like OS=Populus alba OX=43335 GN=D5086_0000309370 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology