Basic Information
Locus ID:
Lb5G27006
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 109081356 | 109083723 | + | Lb5G27006 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 49,436.41 Da | 49.03 | 92.95 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 73 | 148 | 1.99176E-12 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 73 | 148 | 1.99176E-12 | - |
| Pfam | PF00651 | BTB/POZ domain | 73 | 161 | 7.1E-12 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 208 | 281 | 1.9E-7 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 73 | 161 | 7.1E-12 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 208 | 281 | 1.9E-7 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 74 | 162 | 4.08E-12 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 74 | 162 | 4.08E-12 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 24 | 193 | 2.0E-15 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 201 | 301 | 4.3E-10 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 201 | 301 | 4.3E-10 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 24 | 193 | 2.0E-15 | IPR011333 |
| SMART | SM00875 | BACK_2 | 177 | 282 | 3.1E-5 | IPR011705 |
| SMART | SM00875 | BACK_2 | 177 | 282 | 3.1E-5 | IPR011705 |
| SMART | SM00225 | BTB_4 | 50 | 165 | 6.3E-8 | IPR000210 |
| SMART | SM00225 | BTB_4 | 50 | 165 | 6.3E-8 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 73 | 133 | 10.757686 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 73 | 133 | 10.757686 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 430 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_023729157.1 | LOW QUALITY PROTEIN: BTB/POZ domain-containing protein At2g46260-like [Lactuca sativa] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A4P8K8 | Putative chromatin remodeling & transcription regulator BTB-POZ family OS=Lupinus albus OX=3870 GN=Lal_00003989 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||