Basic Information
Locus ID:
Lb5G26881
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
AFC2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 95721849 | 95723514 | + | Lb5G26881 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 29,526.87 Da | 43.00 | 95.14 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 3 | 197 | 1.6E-31 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 3 | 197 | 1.6E-31 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 213 | 7.27E-52 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 213 | 7.27E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 13 | 220 | 1.5E-69 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 39 | 1.5E-69 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 13 | 220 | 1.5E-69 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 39 | 1.5E-69 | - |
| SMART | SM00220 | serkin_6 | 1 | 246 | 1.7E-21 | IPR000719 |
| SMART | SM00220 | serkin_6 | 1 | 246 | 1.7E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 249 | 25.205881 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 249 | 25.205881 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 80 | 92 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 80 | 92 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24740.2 | FUS3-complementing gene 2. a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins. | 0 |
| RefSeq | XP_010027174.1 | serine/threonine-protein kinase AFC2 isoform X2 [Eucalyptus grandis] | 0 |
| P51567 | Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana OX=3702 GN=AFC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B8P8V0 | serine/threonine-protein kinase AFC2 isoform X2 OS=Rhodamnia argentea OX=178133 GN=LOC115741481 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology