Basic Information
Locus ID:
Lb5G26830
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 90414000 | 90419569 | - | Lb5G26830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 59,943.70 Da | 42.74 | 80.53 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 112 | 481 | 0.0 | - |
| CDD | cd05599 | STKc_NDR_like | 112 | 481 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 114 | 417 | 7.8E-65 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 436 | 480 | 3.9E-5 | IPR017892 |
| Pfam | PF00433 | Protein kinase C terminal domain | 436 | 480 | 3.9E-5 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 114 | 417 | 7.8E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 93 | 467 | 3.06E-87 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 93 | 467 | 3.06E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 105 | 199 | 3.3E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 200 | 434 | 1.4E-65 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 200 | 434 | 1.4E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 105 | 199 | 3.3E-33 | - |
| SMART | SM00220 | serkin_6 | 114 | 417 | 7.5E-101 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 418 | 482 | 0.0033 | IPR000961 |
| SMART | SM00133 | pkinase_C_6 | 418 | 482 | 0.0033 | IPR000961 |
| SMART | SM00220 | serkin_6 | 114 | 417 | 7.5E-101 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 418 | 490 | 12.241516 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 114 | 417 | 46.986374 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 114 | 417 | 46.986374 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 418 | 490 | 12.241516 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 233 | 245 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 120 | 143 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 120 | 143 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 233 | 245 | - | IPR008271 |
| Coils | Coil | Coil | 77 | 107 | - | - |
| Coils | Coil | Coil | 77 | 107 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G09890.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_010263541.1 | PREDICTED: serine/threonine-protein kinase tricorner-like isoform X1 [Nelumbo nucifera] | 0 |
| Q9Y2H1 | Serine/threonine-protein kinase 38-like OS=Homo sapiens OX=9606 GN=STK38L PE=1 SV=3 | 0 | |
| TrEMBL | A0A1U8A9Z1 | serine/threonine-protein kinase tricorner-like isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC104601777 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology