Basic Information
Locus ID:
Lb5G26716
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 77718706 | 77723256 | + | Lb5G26716 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.05 | 75,896.45 Da | 49.48 | 82.85 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 107 | 361 | 1.60294E-122 | - |
| CDD | cd08215 | STKc_Nek | 107 | 361 | 1.60294E-122 | - |
| Pfam | PF00069 | Protein kinase domain | 107 | 360 | 9.6E-63 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 107 | 360 | 9.6E-63 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 103 | 402 | 4.59E-80 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 103 | 402 | 4.59E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 87 | 186 | 1.1E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 187 | 373 | 1.4E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 87 | 186 | 1.1E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 187 | 373 | 1.4E-57 | - |
| SMART | SM00220 | serkin_6 | 107 | 365 | 6.5E-75 | IPR000719 |
| SMART | SM00220 | serkin_6 | 107 | 365 | 6.5E-75 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 107 | 365 | 45.431637 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 107 | 365 | 45.431637 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 228 | 240 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 113 | 136 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 113 | 136 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 228 | 240 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 540 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 540 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 544 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 544 | 563 | - | - |
| Coils | Coil | Coil | 589 | 616 | - | - |
| Coils | Coil | Coil | 589 | 616 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_048499780.1 | serine/threonine-protein kinase Nek6 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LT35 | Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana OX=3702 GN=NEK6 PE=3 SV=1 | 0 | |
| TrEMBL | A0A7C9A9R9 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology