Basic Information
Locus ID:
Lb5G26609
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 58728607 | 58732130 | - | Lb5G26609 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 67,826.94 Da | 35.22 | 93.25 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 64 | 103 | 4.0E-13 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 284 | 541 | 9.5E-36 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 284 | 541 | 9.5E-36 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 156 | 177 | 0.5 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 156 | 177 | 0.5 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 64 | 103 | 4.0E-13 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 262 | 542 | 5.47E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 213 | 2.53E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 262 | 542 | 5.47E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 213 | 2.53E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 250 | 347 | 9.6E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 348 | 559 | 5.7E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 63 | 217 | 9.0E-44 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 348 | 559 | 5.7E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 250 | 347 | 9.6E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 63 | 217 | 9.0E-44 | IPR032675 |
| SMART | SM00220 | serkin_6 | 281 | 551 | 1.0E-24 | IPR000719 |
| SMART | SM00220 | serkin_6 | 281 | 551 | 1.0E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 281 | 551 | 31.45311 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 281 | 551 | 31.45311 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 390 | 402 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 390 | 402 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 616 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 616 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_018818686.1 | probable LRR receptor-like serine/threonine-protein kinase At4g30520 isoform X2 [Juglans regia] | 0 |
| Q0WVM4 | Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana OX=3702 GN=At2g23950 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4EH11 | probable LRR receptor-like serine/threonine-protein kinase At4g30520 isoform X2 OS=Juglans regia OX=51240 GN=LOC108989515 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology