halophFGD

Basic Information

Locus ID: Lb5G26520

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: 2-oxoglutarate-dependent dioxygenase family protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr05	31687242	31691199	-	Lb5G26520

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.42	86,610.04 Da	49.23	78.77	-0.46

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	544	634	1.9E-7	IPR003653
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	544	634	1.9E-7	IPR003653
Pfam	PF13532	2OG-Fe(II) oxygenase superfamily	652	767	2.9E-27	IPR027450
Pfam	PF13532	2OG-Fe(II) oxygenase superfamily	652	767	2.9E-27	IPR027450
SUPERFAMILY	SSF51197	Clavaminate synthase-like	674	767	7.69E-23	-
SUPERFAMILY	SSF51197	Clavaminate synthase-like	674	767	7.69E-23	-
SUPERFAMILY	SSF54001	Cysteine proteinases	466	641	9.81E-23	IPR038765
SUPERFAMILY	SSF54001	Cysteine proteinases	466	641	9.81E-23	IPR038765
Gene3D	G3DSA:2.60.120.1520	-	665	770	1.1E-10	-
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	452	664	6.0E-17	-
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	452	664	6.0E-17	-
Gene3D	G3DSA:2.60.120.1520	-	665	770	1.1E-10	-
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	470	636	10.559864	IPR003653
ProSiteProfiles	PS51471	Fe(2+) 2-oxoglutarate dioxygenase domain profile.	680	770	8.076452	IPR005123
ProSiteProfiles	PS51471	Fe(2+) 2-oxoglutarate dioxygenase domain profile.	680	770	8.076452	IPR005123
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	470	636	10.559864	IPR003653
MobiDBLite	mobidb-lite	consensus disorder prediction	257	293	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	257	293	-	-
Coils	Coil	Coil	228	248	-	-
Coils	Coil	Coil	228	248	-	-

Gene Ontology

Biological Process:

GO:0006508 (proteolysis)

Molecular Function:

GO:0008234 (cysteine-type peptidase activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G01780.3	-
RefSeq	XP_048494558.1	uncharacterized protein LOC109134364 [Beta vulgaris subsp. vulgaris]
Swiss-Prot	F4KAV2	DNA N(6)-methyladenine demethylase ALKBH1D OS=Arabidopsis thaliana OX=3702 GN=ALKBH1D PE=1 SV=1
TrEMBL	A0A2Z7B1B4	Fe2OG dioxygenase domain-containing protein (Fragment) OS=Dorcoceras hygrometricum OX=472368 GN=F511_04595 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047