Basic Information
Locus ID:
Lb5G26446
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
DNA-directed 5'-3' RNA polymerase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 9681824 | 9685995 | - | Lb5G26446 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 40,221.95 Da | 47.12 | 68.35 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 101 | 356 | 9.9E-81 | IPR033389 |
| Pfam | PF02309 | AUX/IAA family | 101 | 356 | 9.9E-81 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 240 | 347 | 4.12E-20 | - |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 240 | 347 | 4.12E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 240 | 361 | 2.2E-40 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 240 | 361 | 2.2E-40 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 246 | 349 | 24.682621 | IPR000270 |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 246 | 349 | 24.682621 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 237 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_009388718.1 | PREDICTED: auxin-responsive protein IAA17 [Musa acuminata subsp. malaccensis] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | G9C9B5 | Auxin-responsive protein OS=Musa acuminata AAA Group OX=214697 GN=IAA9 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology