halophFGD

Basic Information

Locus ID: Lb4G26371

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: transposon protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr04	337994039	338000682	+	Lb4G26371

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.69	165,665.14 Da	46.66	73.59	-0.62

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1348	1438	1.1E-12	IPR003653
Pfam	PF13952	Domain of unknown function (DUF4216)	617	685	4.1E-14	IPR025312
Pfam	PF02992	Transposase family tnp2	294	367	5.3E-16	IPR004242
Pfam	PF02992	Transposase family tnp2	294	367	5.3E-16	IPR004242
Pfam	PF13960	Domain of unknown function (DUF4218)	355	455	3.0E-34	IPR025452
Pfam	PF13963	Transposase-associated domain	3	73	1.9E-15	IPR029480
Pfam	PF13960	Domain of unknown function (DUF4218)	355	455	3.0E-34	IPR025452
Pfam	PF13952	Domain of unknown function (DUF4216)	617	685	4.1E-14	IPR025312
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1348	1438	1.1E-12	IPR003653
Pfam	PF13963	Transposase-associated domain	3	73	1.9E-15	IPR029480
SUPERFAMILY	SSF54001	Cysteine proteinases	1316	1439	5.49E-20	IPR038765
SUPERFAMILY	SSF54001	Cysteine proteinases	1316	1439	5.49E-20	IPR038765
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1303	1446	1.9E-17	-
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1303	1446	1.9E-17	-
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	1192	1435	10.735262	IPR003653
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	1192	1435	10.735262	IPR003653
MobiDBLite	mobidb-lite	consensus disorder prediction	1114	1133	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	735	819	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	735	819	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1114	1133	-	-
Coils	Coil	Coil	1082	1102	-	-
Coils	Coil	Coil	1082	1102	-	-

Gene Ontology

Biological Process:

GO:0006508 (proteolysis)

Molecular Function:

GO:0008234 (cysteine-type peptidase activity)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_031097890.1	uncharacterized protein LOC116002025 [Ipomoea triloba]	0
TrEMBL	A0A8B8M6U3	uncharacterized protein LOC113871494 OS=Abrus precatorius OX=3816 GN=LOC113871494 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047