Basic Information
Locus ID:
Lb4G26357
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 335477550 | 335479792 | - | Lb4G26357 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 71,740.03 Da | 44.33 | 90.52 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 385 | 631 | 2.2E-25 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 224 | 245 | 0.47 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 145 | 166 | 0.83 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 224 | 245 | 0.47 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 145 | 166 | 0.83 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 385 | 631 | 2.2E-25 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 385 | 633 | 1.94E-51 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 270 | 7.06E-34 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 270 | 7.06E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 385 | 633 | 1.94E-51 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 166 | 5.0E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 167 | 294 | 1.6E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 458 | 652 | 3.1E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 342 | 457 | 4.2E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 166 | 5.0E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 342 | 457 | 4.2E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 167 | 294 | 1.6E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 458 | 652 | 3.1E-34 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 381 | 640 | 25.658169 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 381 | 640 | 25.658169 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 633 | 656 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 633 | 656 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 656 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 656 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51740.1 | inflorescence meristem receptor-like kinase 2. encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors. | 0 |
| RefSeq | XP_012086644.1 | probable leucine-rich repeat receptor-like protein kinase IMK3 [Jatropha curcas] | 0 |
| C0LGP9 | Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana OX=3702 GN=IMK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A200QBJ6 | Protein kinase domain OS=Macleaya cordata OX=56857 GN=BVC80_8649g10 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G26357 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.511, evm.TU.LG26.527 |