Basic Information
Locus ID:
Lb4G26346
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 334587797 | 334589867 | - | Lb4G26346 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 34,306.95 Da | 25.28 | 87.78 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 197 | 259 | 1.84726E-18 | IPR002048 |
| CDD | cd00051 | EFh | 197 | 259 | 1.84726E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 196 | 259 | 6.6E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 10 | 78 | 1.7E-11 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 196 | 259 | 6.6E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 126 | 185 | 1.4E-8 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 10 | 78 | 1.7E-11 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 126 | 185 | 1.4E-8 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 107 | 285 | 9.94E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 102 | 1.16E-17 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 107 | 285 | 9.94E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 102 | 1.16E-17 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 85 | 262 | 1.5E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 9 | 79 | 8.0E-20 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 85 | 262 | 1.5E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 9 | 79 | 8.0E-20 | - |
| SMART | SM00054 | efh_1 | 125 | 153 | 4.8E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 197 | 225 | 3.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 197 | 225 | 3.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 161 | 189 | 0.0051 | IPR002048 |
| SMART | SM00054 | efh_1 | 233 | 261 | 9.0E-8 | IPR002048 |
| SMART | SM00054 | efh_1 | 125 | 153 | 4.8E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 233 | 261 | 9.0E-8 | IPR002048 |
| SMART | SM00054 | efh_1 | 161 | 189 | 0.0051 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 121 | 156 | 14.206556 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 157 | 192 | 10.691735 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 121 | 156 | 14.206556 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 78 | 10.18144 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 78 | 10.18144 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 229 | 264 | 14.513405 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 193 | 228 | 14.346033 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 193 | 228 | 14.346033 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 229 | 264 | 14.513405 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 157 | 192 | 10.691735 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 170 | 182 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 206 | 218 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 170 | 182 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 242 | 254 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 206 | 218 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 242 | 254 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74740.1 | calcium-dependent protein kinase 30. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021761687.1 | calcium-dependent protein kinase 10-like [Chenopodium quinoa] | 0 |
| Q9SSF8 | Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana OX=3702 GN=CPK30 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7AT43 | Putative calcium-dependent protein kinase 10-like OS=Davidia involucrata OX=16924 GN=Din_029200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology