Basic Information
Locus ID:
Lb4G25781
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 287248525 | 287250425 | - | Lb4G25781 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 44,940.64 Da | 41.36 | 90.19 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 55 | 147 | 6.3E-6 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 218 | 348 | 7.0E-10 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 218 | 348 | 7.0E-10 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 55 | 147 | 6.3E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 49 | 159 | 5.1E-18 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 203 | 349 | 5.89E-16 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 203 | 349 | 5.89E-16 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 49 | 159 | 5.1E-18 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 210 | 349 | 5.2E-9 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 42 | 171 | 2.0E-10 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 210 | 349 | 5.2E-9 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 42 | 171 | 2.0E-10 | IPR036378 |
| SMART | SM00554 | fasc_3 | 79 | 196 | 2.6 | IPR000782 |
| SMART | SM00554 | fasc_3 | 79 | 196 | 2.6 | IPR000782 |
| SMART | SM00554 | fasc_3 | 244 | 349 | 1.9E-8 | IPR000782 |
| SMART | SM00554 | fasc_3 | 244 | 349 | 1.9E-8 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 206 | 346 | 8.614857 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 43 | 193 | 10.33637 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 206 | 346 | 8.614857 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 43 | 193 | 10.33637 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 399 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_021766350.1 | fasciclin-like arabinogalactan protein 2 [Chenopodium quinoa] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MGL8 | Fasciclin-like arabinogalactan protein 2 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology