Basic Information
Locus ID:
Lb4G25712
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
rRNA N-glycosidase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 278095960 | 278096783 | + | Lb4G25712 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.83 | 27,730.41 Da | 54.95 | 80.77 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00161 | Ribosome inactivating protein | 16 | 92 | 5.6E-6 | IPR001574 |
| Pfam | PF00161 | Ribosome inactivating protein | 16 | 92 | 5.6E-6 | IPR001574 |
| SUPERFAMILY | SSF56371 | Ribosome inactivating proteins (RIP) | 8 | 85 | 1.19E-7 | IPR036041 |
| SUPERFAMILY | SSF56371 | Ribosome inactivating proteins (RIP) | 8 | 85 | 1.19E-7 | IPR036041 |
| Gene3D | G3DSA:3.40.420.10 | Ricin (A subunit), domain 1 | 1 | 120 | 1.1E-11 | IPR016138 |
| Gene3D | G3DSA:3.40.420.10 | Ricin (A subunit), domain 1 | 1 | 120 | 1.1E-11 | IPR016138 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 155 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_028792467.1 | uncharacterized protein LOC114748277 [Prosopis alba] | 0 |
| TrEMBL | A0A835MGZ6 | DUF6598 domain-containing protein OS=Salix dunnii OX=1413687 GN=SADUNF_Sadunf17G0023500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology