Basic Information
Locus ID:
Lb4G25490
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 238907820 | 238925181 | + | Lb4G25490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 98,347.60 Da | 29.99 | 88.01 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 552 | 818 | 8.72204E-92 | - |
| CDD | cd14066 | STKc_IRAK | 552 | 818 | 8.72204E-92 | - |
| Pfam | PF11721 | Malectin domain | 305 | 491 | 3.3E-37 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 548 | 816 | 3.3E-49 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 305 | 491 | 3.3E-37 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 548 | 816 | 3.3E-49 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 10 | 261 | 7.37E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 529 | 817 | 1.62E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 10 | 261 | 7.37E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 529 | 817 | 1.62E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 622 | 826 | 7.3E-55 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 301 | 496 | 4.2E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 510 | 621 | 5.0E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 9 | 159 | 1.0E-30 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 301 | 496 | 4.2E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 622 | 826 | 7.3E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 160 | 282 | 2.9E-16 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 510 | 621 | 5.0E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 160 | 282 | 2.9E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 9 | 159 | 1.0E-30 | IPR032675 |
| SMART | SM00220 | serkin_6 | 546 | 816 | 5.3E-32 | IPR000719 |
| SMART | SM00220 | serkin_6 | 546 | 816 | 5.3E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 546 | 822 | 37.71447 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 546 | 822 | 37.71447 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 666 | 678 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 666 | 678 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G29750.1 | receptor-like kinase in flowers 1. Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains. | 0 |
| RefSeq | XP_028081409.1 | probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X3 [Camellia sinensis] | 0 |
| Q9FXF2 | Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana OX=3702 GN=RKF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J4ZAU4 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_018173 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology