halophFGD

Basic Information

Locus ID: Lb4G25437

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: source UniProtKB

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr04	230196268	230205454	-	Lb4G25437

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.64	206,551.30 Da	45.50	76.79	-0.54

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13952	Domain of unknown function (DUF4216)	846	914	4.6E-13	IPR025312
Pfam	PF13960	Domain of unknown function (DUF4218)	573	685	2.9E-40	IPR025452
Pfam	PF13952	Domain of unknown function (DUF4216)	846	914	4.6E-13	IPR025312
Pfam	PF02992	Transposase family tnp2	231	441	4.9E-86	IPR004242
Pfam	PF13963	Transposase-associated domain	3	77	1.6E-14	IPR029480
Pfam	PF13960	Domain of unknown function (DUF4218)	573	685	2.9E-40	IPR025452
Pfam	PF02992	Transposase family tnp2	231	441	4.9E-86	IPR004242
Pfam	PF13963	Transposase-associated domain	3	77	1.6E-14	IPR029480
SUPERFAMILY	SSF54001	Cysteine proteinases	1565	1734	1.42E-18	IPR038765
SUPERFAMILY	SSF54001	Cysteine proteinases	1565	1734	1.42E-18	IPR038765
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1552	1751	3.3E-14	-
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1552	1751	3.3E-14	-
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	1570	1732	9.194268	IPR003653
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	1570	1732	9.194268	IPR003653
MobiDBLite	mobidb-lite	consensus disorder prediction	1354	1377	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	923	950	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	979	1050	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	85	117	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	86	117	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1354	1377	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	979	1050	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	923	950	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	86	117	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	85	117	-	-

Gene Ontology

Biological Process:

GO:0006508 (proteolysis)

Molecular Function:

GO:0008234 (cysteine-type peptidase activity)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_019188808.1	PREDICTED: uncharacterized protein LOC109183047 [Ipomoea nil]	0
TrEMBL	A0A445LEM3	Transposase (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_007717 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047