halophFGD

Basic Information

Locus ID: Lb4G25423

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: source UniProtKB

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr04	228445903	228452165	+	Lb4G25423

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.49	137,601.45 Da	46.86	69.49	-0.71

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02992	Transposase family tnp2	304	438	8.3E-59	IPR004242
Pfam	PF02992	Transposase family tnp2	304	438	8.3E-59	IPR004242
Pfam	PF13963	Transposase-associated domain	3	77	2.5E-14	IPR029480
Pfam	PF13963	Transposase-associated domain	3	77	2.5E-14	IPR029480
SUPERFAMILY	SSF54001	Cysteine proteinases	1090	1196	1.31E-8	IPR038765
SUPERFAMILY	SSF54001	Cysteine proteinases	1090	1196	1.31E-8	IPR038765
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1080	1207	1.8E-5	-
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1080	1207	1.8E-5	-
MobiDBLite	mobidb-lite	consensus disorder prediction	574	621	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	522	545	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	83	117	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	83	117	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	910	935	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	574	621	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	522	545	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	910	935	-	-
Coils	Coil	Coil	881	901	-	-
Coils	Coil	Coil	881	901	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021766290.1	uncharacterized protein LOC110730777 [Chenopodium quinoa]	0
TrEMBL	A0A1S2YL77	uncharacterized protein LOC101492240 OS=Cicer arietinum OX=3827 GN=LOC101492240 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047