Basic Information
Locus ID:
Lb4G25402
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 223616725 | 223619360 | - | Lb4G25402 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 13,663.60 Da | 43.20 | 73.39 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 30 | 100 | 1.7E-13 | IPR022617 |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 30 | 100 | 1.7E-13 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 23 | 105 | 9.84E-20 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 23 | 105 | 9.84E-20 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 105 | 1.8E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 105 | 1.8E-25 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 30 | 105 | 10.092108 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 30 | 105 | 10.092108 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55160.1 | small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | 0 |
| RefSeq | NP_200327.1 | small ubiquitin-like modifier 2 [Arabidopsis thaliana] | 0 |
| Q9FLP6 | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A178UNS2 | Small ubiquitin-related modifier OS=Arabidopsis thaliana OX=3702 GN=AXX17_At5g54290 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology