Basic Information
Locus ID:
Lb4G25366
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 219025990 | 219029330 | + | Lb4G25366 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 75,700.52 Da | 55.96 | 70.56 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 492 | 568 | 7.60096E-44 | - |
| CDD | cd11449 | bHLH_AtAIB_like | 492 | 568 | 7.60096E-44 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 85 | 261 | 4.9E-38 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 499 | 544 | 1.7E-10 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 85 | 261 | 4.9E-38 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 499 | 544 | 1.7E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 498 | 565 | 9.81E-18 | IPR036638 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 498 | 565 | 9.81E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 487 | 575 | 3.0E-16 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 487 | 575 | 3.0E-16 | IPR036638 |
| SMART | SM00353 | finulus | 501 | 550 | 8.6E-16 | IPR011598 |
| SMART | SM00353 | finulus | 501 | 550 | 8.6E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 495 | 544 | 17.288345 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 495 | 544 | 17.288345 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 413 | - | - |
| Coils | Coil | Coil | 541 | 575 | - | - |
| Coils | Coil | Coil | 541 | 575 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46760.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. | 0 |
| RefSeq | XP_017973469.1 | PREDICTED: transcription factor MYC2 [Theobroma cacao] | 0 |
| A0A3Q7HRZ6 | Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | Q4JKA7 | Basic helix-loop-helix transcription factor protein OS=Rheum australe OX=284363 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology