Basic Information
Locus ID:
Lb4G25227
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Plant transposase (Ptta/En/Spm family)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 196015365 | 196017928 | + | Lb4G25227 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 26,571.34 Da | 24.23 | 49.40 | -1.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 48 | 170 | 2.9E-22 | IPR004252 |
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 48 | 170 | 2.9E-22 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 156 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 156 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 235 | - | - |
| Coils | Coil | Coil | 235 | 235 | - | - |
| Coils | Coil | Coil | 235 | 235 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_024634947.1 | uncharacterized protein LOC112420329 [Medicago truncatula] | 0 |
| TrEMBL | A0A1R3KAF0 | Transposase, Ptta/En/Spm, plant OS=Corchorus olitorius OX=93759 GN=COLO4_09996 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||