Basic Information
Locus ID:
Lb4G25123
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Domain of unknown function (DUF3403)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 182460552 | 182482116 | + | Lb4G25123 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 97,064.47 Da | 36.83 | 87.04 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 253 | 331 | 1.2E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 349 | 443 | 1.6E-6 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 349 | 443 | 1.6E-6 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 553 | 818 | 8.9E-29 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 553 | 818 | 8.9E-29 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 253 | 331 | 1.2E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 530 | 820 | 2.87E-59 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 530 | 820 | 2.87E-59 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 246 | 333 | 2.0E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 246 | 333 | 2.0E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 340 | 447 | 7.0E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 340 | 447 | 7.0E-15 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 614 | 827 | 2.0E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 522 | 609 | 1.9E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 522 | 609 | 1.9E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 614 | 827 | 2.0E-49 | - |
| SMART | SM00220 | serkin_6 | 551 | 820 | 3.5E-11 | IPR000719 |
| SMART | SM00220 | serkin_6 | 551 | 820 | 3.5E-11 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 339 | 447 | 15.447859 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 551 | 832 | 27.594528 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 339 | 447 | 15.447859 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 551 | 832 | 27.594528 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 669 | 681 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 669 | 681 | - | IPR008271 |
| Coils | Coil | Coil | 410 | 430 | - | - |
| Coils | Coil | Coil | 410 | 430 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021746898.1 | cysteine-rich receptor-like protein kinase 25 [Chenopodium quinoa] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A0B2RF01 | Cysteine-rich receptor-like protein kinase 10 OS=Glycine soja OX=3848 GN=D0Y65_002487 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||