Basic Information
Locus ID:
Lb4G25122
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Domain of unknown function (DUF3403)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 182454322 | 182457426 | + | Lb4G25122 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 78,559.70 Da | 41.11 | 89.53 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 376 | 642 | 8.06918E-98 | - |
| CDD | cd14066 | STKc_IRAK | 376 | 642 | 8.06918E-98 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 52 | 146 | 2.0E-17 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 372 | 639 | 6.2E-48 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 165 | 259 | 1.1E-9 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 52 | 146 | 2.0E-17 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 165 | 259 | 1.1E-9 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 372 | 639 | 6.2E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 355 | 669 | 4.72E-81 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 355 | 669 | 4.72E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 333 | 445 | 2.5E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 333 | 445 | 2.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 648 | 4.4E-57 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 46 | 148 | 2.4E-21 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 648 | 4.4E-57 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 46 | 148 | 2.4E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 154 | 263 | 1.0E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 154 | 263 | 1.0E-17 | IPR038408 |
| SMART | SM00220 | serkin_6 | 370 | 641 | 1.7E-34 | IPR000719 |
| SMART | SM00220 | serkin_6 | 370 | 641 | 1.7E-34 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 47 | 149 | 17.457426 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 47 | 149 | 17.457426 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 370 | 653 | 38.802788 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 155 | 263 | 16.597475 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 155 | 263 | 16.597475 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 370 | 653 | 38.802788 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 491 | 503 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 491 | 503 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 376 | 398 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 376 | 398 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 670 | 700 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 670 | 700 | - | - |
| Coils | Coil | Coil | 226 | 246 | - | - |
| Coils | Coil | Coil | 226 | 246 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021746898.1 | cysteine-rich receptor-like protein kinase 25 [Chenopodium quinoa] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803N951 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||