Basic Information
Locus ID:
Lb4G24773
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 152684203 | 152690522 | - | Lb4G24773 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 90,334.34 Da | 39.80 | 76.04 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03108 | MuDR family transposase | 284 | 347 | 3.7E-5 | IPR004332 |
| Pfam | PF04434 | SWIM zinc finger | 651 | 684 | 6.8E-8 | IPR007527 |
| Pfam | PF03108 | MuDR family transposase | 284 | 347 | 3.7E-5 | IPR004332 |
| Pfam | PF04434 | SWIM zinc finger | 651 | 684 | 6.8E-8 | IPR007527 |
| SMART | SM00575 | 26again6 | 663 | 690 | 0.002 | IPR006564 |
| SMART | SM00575 | 26again6 | 663 | 690 | 0.002 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 656 | 688 | 9.668254 | IPR007527 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 656 | 688 | 9.668254 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 235 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64255.1 | MuDR family transposase. | 0 |
| RefSeq | XP_028765105.1 | uncharacterized protein LOC114723117 [Prosopis alba] | 0 |
| TrEMBL | A0A6A5PQ92 | SWIM-type domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00032071 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||