Basic Information
Locus ID:
Lb4G24739
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Type I inositol 1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 150410903 | 150420060 | - | Lb4G24739 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 28,041.09 Da | 36.39 | 74.34 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56219 | DNase I-like | 106 | 165 | 1.57E-13 | IPR036691 |
| SUPERFAMILY | SSF56219 | DNase I-like | 106 | 165 | 1.57E-13 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 104 | 179 | 2.3E-23 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 104 | 179 | 2.3E-23 | IPR036691 |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G47510.2 | inositol polyphosphate 5-phosphatase 11. Encodes a phosphatidylinositol polyphosphate 5-phosphatase. It can dephosphorylate PI(4,5)P2, PI(3,5)P2, and PI(3,4,5)P3, but, it is not active against PI(5)P or the water soluble inositol(1,4,5)P3 or inositol(1,3,4,5)P4. The transcript levels for this gene rise in response to auxin, ABA, and JA. | 0 |
| RefSeq | XP_013590158.1 | PREDICTED: type IV inositol polyphosphate 5-phosphatase 11 [Brassica oleracea var. oleracea] | 0 |
| Q5EAF2 | Type IV inositol polyphosphate 5-phosphatase 11 OS=Arabidopsis thaliana OX=3702 GN=IP5P11 PE=1 SV=1 | 0 | |
| TrEMBL | V4N2N1 | Endo/exonuclease/phosphatase domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10001276mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg22827 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000044911 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30046050 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103723945 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G47510.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10001276m.g.v1.0, Thhalv10011683m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g34540.v2.2, Sp7g05230.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB04g063540.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1653 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G1774 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0445s00008.v1.0 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00026789 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb3G15810, Lb4G24739 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.1192, CH01.1456, CH04.2200 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0225770, gene-QOZ80_3BG0270670 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0341090.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_062969 |
| Poaceae | Oryza coarctata | 2 | Oco03G010180, Oco05G018420 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g42810.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G150200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0104426 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr01G009890, Chr04G024550, Chr07G023280, Chr12G027050 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G113600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG038510, gene_TRIDC4BG010860 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G244500.1, TraesCS4B02G070500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb051200_P003 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-20383 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g3239 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132627952 |
| Solanaceae | Solanum chilense | 1 | SOLCI003582200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107017256 |