HalophFGD

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Basic Information
Locus ID: Lb4G24086
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: Serine threonine-protein phosphatase 7 long form homolog
Maps and Mapping Data
Chromosome Start End Strand ID
chr04 106707717 106710040 + Lb4G24086
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.59 58,565.98 Da 51.58 79.18 -0.38
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF10536 Plant mobile domain 8 259 3.4E-42 IPR019557
Pfam PF10536 Plant mobile domain 8 259 3.4E-42 IPR019557
MobiDBLite mobidb-lite consensus disorder prediction 474 496 - -
MobiDBLite mobidb-lite consensus disorder prediction 474 496 - -
MobiDBLite mobidb-lite consensus disorder prediction 474 504 - -
MobiDBLite mobidb-lite consensus disorder prediction 474 504 - -
KEGG Pathway
KO Term:
K12448 (UDP-arabinose 4-epimerase [EC:5.1.3.5])
Pathway:
ko00520 (Amino sugar and nucleotide sugar metabolism) map00520 (Amino sugar and nucleotide sugar metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)
Reaction:
R01473 (UDP-L-arabinose <=> UDP-D-xylose)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G48120.1 hydrolases;protein serine/threonine phosphatases. 0
RefSeq XP_028242202.1 serine/threonine-protein phosphatase 7 long form homolog [Glycine soja] 0
Swiss-Prot Q9LNG5 Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1 0
TrEMBL A0A445H797 Serine/threonine-protein phosphatase 7 long form-like OS=Glycine soja OX=3848 GN=D0Y65_039070 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plumbaginaceae Limonium bicolor 139 Lb0G36958, Lb0G37625, Lb0G37651, Lb0G37832, Lb1G00074 ...
Lb1G01041, Lb1G01284, Lb1G01302, Lb1G01313, Lb1G01909, Lb1G02090, Lb1G02171, Lb1G02262, Lb1G02725, Lb1G03091, Lb1G03104, Lb1G03576, Lb1G03653, Lb1G03691, Lb1G03810, Lb1G04104, Lb1G04204, Lb1G04764, Lb1G04782, Lb1G04978, Lb1G05127, Lb1G05421, Lb1G06522, Lb1G06694, Lb1G06709, Lb1G06915, Lb1G07575, Lb1G07974, Lb2G08452, Lb2G08754, Lb2G08786, Lb2G09330, Lb2G09354, Lb2G09788, Lb2G09791, Lb2G09872, Lb2G10149, Lb2G10277, Lb2G10339, Lb2G10401, Lb2G10547, Lb2G10571, Lb2G10595, Lb2G10645, Lb2G10858, Lb2G11128, Lb2G11176, Lb2G11301, Lb2G11392, Lb2G11722, Lb2G11723, Lb2G11726, Lb2G11880, Lb2G11994, Lb2G12006, Lb2G12180, Lb2G13380, Lb2G13858, Lb2G14192, Lb2G14385, Lb2G14802, Lb2G14815, Lb2G15389, Lb3G15874, Lb3G15888, Lb3G16904, Lb3G17648, Lb3G18076, Lb3G18459, Lb3G18462, Lb3G18835, Lb3G19004, Lb3G19049, Lb3G19141, Lb3G19410, Lb3G19564, Lb3G19669, Lb3G19745, Lb3G19968, Lb3G20348, Lb3G20349, Lb3G20424, Lb3G20556, Lb3G20584, Lb3G20837, Lb3G20990, Lb3G20991, Lb3G21080, Lb4G21491, Lb4G21493, Lb4G21495, Lb4G22778, Lb4G23783, Lb4G23798, Lb4G23803, Lb4G24071, Lb4G24085, Lb4G24086, Lb4G24642, Lb4G24910, Lb4G24972, Lb4G25774, Lb4G25880, Lb5G26602, Lb5G26603, Lb5G26645, Lb5G27050, Lb5G27731, Lb5G27935, Lb5G27936, Lb5G28415, Lb5G29025, Lb5G29564, Lb6G30134, Lb6G30265, Lb6G30266, Lb6G30292, Lb6G30447, Lb6G30649, Lb6G31356, Lb6G31492, Lb6G31691, Lb6G31840, Lb6G32579, Lb7G33114, Lb7G33326, Lb7G33404, Lb7G34305, Lb7G35257, Lb7G35440, Lb7G35441, Lb8G36625, Lb8G36627, Lb8G36629
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.