HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Lb4G24071
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: Serine threonine-protein phosphatase
Maps and Mapping Data
Chromosome Start End Strand ID
chr04 106431378 106433295 - Lb4G24071
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.59 55,298.07 Da 63.83 72.41 -0.58
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 292 324 - -
MobiDBLite mobidb-lite consensus disorder prediction 360 384 - -
MobiDBLite mobidb-lite consensus disorder prediction 360 374 - -
MobiDBLite mobidb-lite consensus disorder prediction 360 384 - -
MobiDBLite mobidb-lite consensus disorder prediction 292 324 - -
MobiDBLite mobidb-lite consensus disorder prediction 360 374 - -
KEGG Pathway
KO Term:
K04460 (serine/threonine-protein phosphatase 5 [EC:3.1.3.16])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G48120.1 hydrolases;protein serine/threonine phosphatases. 0
RefSeq XP_028765107.1 serine/threonine-protein phosphatase 7 long form homolog [Prosopis alba] 0
Swiss-Prot Q9LNG5 Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1 0
TrEMBL A0A6A5PMN0 PMD domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00033014 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plumbaginaceae Limonium bicolor 139 Lb0G36958, Lb0G37625, Lb0G37651, Lb0G37832, Lb1G00074 ...
Lb1G01041, Lb1G01284, Lb1G01302, Lb1G01313, Lb1G01909, Lb1G02090, Lb1G02171, Lb1G02262, Lb1G02725, Lb1G03091, Lb1G03104, Lb1G03576, Lb1G03653, Lb1G03691, Lb1G03810, Lb1G04104, Lb1G04204, Lb1G04764, Lb1G04782, Lb1G04978, Lb1G05127, Lb1G05421, Lb1G06522, Lb1G06694, Lb1G06709, Lb1G06915, Lb1G07575, Lb1G07974, Lb2G08452, Lb2G08754, Lb2G08786, Lb2G09330, Lb2G09354, Lb2G09788, Lb2G09791, Lb2G09872, Lb2G10149, Lb2G10277, Lb2G10339, Lb2G10401, Lb2G10547, Lb2G10571, Lb2G10595, Lb2G10645, Lb2G10858, Lb2G11128, Lb2G11176, Lb2G11301, Lb2G11392, Lb2G11722, Lb2G11723, Lb2G11726, Lb2G11880, Lb2G11994, Lb2G12006, Lb2G12180, Lb2G13380, Lb2G13858, Lb2G14192, Lb2G14385, Lb2G14802, Lb2G14815, Lb2G15389, Lb3G15874, Lb3G15888, Lb3G16904, Lb3G17648, Lb3G18076, Lb3G18459, Lb3G18462, Lb3G18835, Lb3G19004, Lb3G19049, Lb3G19141, Lb3G19410, Lb3G19564, Lb3G19669, Lb3G19745, Lb3G19968, Lb3G20348, Lb3G20349, Lb3G20424, Lb3G20556, Lb3G20584, Lb3G20837, Lb3G20990, Lb3G20991, Lb3G21080, Lb4G21491, Lb4G21493, Lb4G21495, Lb4G22778, Lb4G23783, Lb4G23798, Lb4G23803, Lb4G24071, Lb4G24085, Lb4G24086, Lb4G24642, Lb4G24910, Lb4G24972, Lb4G25774, Lb4G25880, Lb5G26602, Lb5G26603, Lb5G26645, Lb5G27050, Lb5G27731, Lb5G27935, Lb5G27936, Lb5G28415, Lb5G29025, Lb5G29564, Lb6G30134, Lb6G30265, Lb6G30266, Lb6G30292, Lb6G30447, Lb6G30649, Lb6G31356, Lb6G31492, Lb6G31691, Lb6G31840, Lb6G32579, Lb7G33114, Lb7G33326, Lb7G33404, Lb7G34305, Lb7G35257, Lb7G35440, Lb7G35441, Lb8G36625, Lb8G36627, Lb8G36629
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.