halophFGD

Basic Information

Locus ID: Lb4G23391

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: source UniProtKB

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr04	75254982	75266256	-	Lb4G23391

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.57	182,136.69 Da	44.66	78.97	-0.45

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF04749	PLAC8 family	1491	1559	2.2E-14	IPR006461
Pfam	PF02992	Transposase family tnp2	258	472	1.7E-87	IPR004242
Pfam	PF13963	Transposase-associated domain	2	61	7.8E-12	IPR029480
Pfam	PF13960	Domain of unknown function (DUF4218)	584	692	7.4E-39	IPR025452
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1356	1445	1.2E-7	IPR003653
Pfam	PF02992	Transposase family tnp2	258	472	1.7E-87	IPR004242
Pfam	PF04749	PLAC8 family	1491	1559	2.2E-14	IPR006461
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1356	1445	1.2E-7	IPR003653
Pfam	PF13960	Domain of unknown function (DUF4218)	584	692	7.4E-39	IPR025452
Pfam	PF13963	Transposase-associated domain	2	61	7.8E-12	IPR029480
SUPERFAMILY	SSF54001	Cysteine proteinases	1337	1448	9.22E-16	IPR038765
SUPERFAMILY	SSF54001	Cysteine proteinases	1337	1448	9.22E-16	IPR038765
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1318	1464	3.3E-13	-
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1318	1464	3.3E-13	-
TIGRFAM	TIGR01571	A_thal_Cys_rich: uncharacterized Cys-rich domain	1489	1561	5.1E-16	IPR006461
TIGRFAM	TIGR01571	A_thal_Cys_rich: uncharacterized Cys-rich domain	1489	1561	5.1E-16	IPR006461
MobiDBLite	mobidb-lite	consensus disorder prediction	907	948	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1135	1156	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1135	1156	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	907	948	-	-
Coils	Coil	Coil	1190	1210	-	-
Coils	Coil	Coil	1190	1210	-	-

Gene Ontology

Biological Process:

GO:0006508 (proteolysis)

Molecular Function:

GO:0008234 (cysteine-type peptidase activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G14870.1	PLANT CADMIUM RESISTANCE 2.
RefSeq	XP_031097890.1	uncharacterized protein LOC116002025 [Ipomoea triloba]
Swiss-Prot	D9HP25	Cell number regulator 9 OS=Zea mays OX=4577 GN=CNR9 PE=2 SV=1
TrEMBL	A0A8B8KW83	uncharacterized protein LOC113859703 OS=Abrus precatorius OX=3816 GN=LOC113859703 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047