HalophFGD

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Basic Information
Locus ID: Lb4G23298
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: Transcription initiation factor TFIID subunit 5
Maps and Mapping Data
Chromosome Start End Strand ID
chr04 70715371 70716325 + Lb4G23298
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.04 18,414.92 Da 29.87 66.44 -0.68
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
KEGG Pathway
KO Term:
K03130 (transcription initiation factor TFIID subunit 5)
Pathway:
ko03022 (Basal transcription factors) map03022 (Basal transcription factors)
Best hit
Source Best Hit ID Description E-value
TrEMBL A0A1R3FYV8 Transposase, Ptta/En/Spm, plant OS=Corchorus capsularis OX=210143 GN=CCACVL1_30065 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plantaginaceae Plantago ovata 1 Pov_00029966
Plumbaginaceae Limonium bicolor 80 Lb0G36886, Lb0G36887, Lb0G37772, Lb0G38155, Lb0G38193 ...
Lb0G38347, Lb1G00948, Lb1G01147, Lb1G01591, Lb1G02625, Lb1G02820, Lb1G02852, Lb1G04343, Lb1G04639, Lb1G05087, Lb1G05597, Lb1G05963, Lb1G06535, Lb1G07279, Lb1G07281, Lb1G07990, Lb1G08043, Lb2G09223, Lb2G09468, Lb2G09844, Lb2G09848, Lb2G11693, Lb2G12153, Lb2G13242, Lb2G13325, Lb2G14500, Lb2G14591, Lb2G14761, Lb2G15067, Lb3G15627, Lb3G15827, Lb3G15894, Lb3G15899, Lb3G15900, Lb3G16217, Lb3G17174, Lb3G17349, Lb3G17676, Lb3G18214, Lb3G19096, Lb3G19232, Lb3G19600, Lb3G20294, Lb3G20487, Lb3G20488, Lb3G20490, Lb4G22660, Lb4G22735, Lb4G23163, Lb4G23298, Lb4G24426, Lb4G25227, Lb4G25897, Lb4G26010, Lb4G26063, Lb4G26366, Lb5G26727, Lb5G28015, Lb5G29538, Lb6G29862, Lb6G30293, Lb6G30330, Lb6G30593, Lb6G31279, Lb6G32079, Lb7G32807, Lb7G33414, Lb7G33483, Lb7G33604, Lb7G34482, Lb7G34630, Lb7G35316, Lb8G35799, Lb8G35833, Lb8G36218
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.