Basic Information
Locus ID:
Lb4G23163
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Plant transposase (Ptta/En/Spm family)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 63864173 | 63867187 | + | Lb4G23163 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 45,934.99 Da | 48.96 | 65.95 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 218 | 345 | 3.0E-21 | IPR004252 |
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 218 | 345 | 3.0E-21 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 410 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 410 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 363 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G40087.1 | Plant transposase (Ptta/En/Spm family). | 0 |
| RefSeq | XP_039134219.1 | uncharacterized protein LOC120271605 [Dioscorea cayenensis subsp. rotundata] | 0 |
| TrEMBL | A0A2K3L4U5 | Transposase, Ptta/En/Spm, plant OS=Trifolium pratense OX=57577 GN=L195_g029441 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||