Basic Information
Locus ID:
Lb4G23117
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
NEK1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 61401267 | 61406549 | - | Lb4G23117 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 74,469.95 Da | 51.42 | 73.99 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 30 | 285 | 2.85474E-134 | - |
| CDD | cd08215 | STKc_Nek | 30 | 285 | 2.85474E-134 | - |
| Pfam | PF00069 | Protein kinase domain | 31 | 284 | 1.3E-62 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 31 | 284 | 1.3E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 28 | 286 | 2.83E-80 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 28 | 286 | 2.83E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 13 | 110 | 2.0E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 111 | 303 | 4.0E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 13 | 110 | 2.0E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 111 | 303 | 4.0E-55 | - |
| SMART | SM00220 | serkin_6 | 31 | 285 | 7.2E-80 | IPR000719 |
| SMART | SM00220 | serkin_6 | 31 | 285 | 7.2E-80 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 31 | 285 | 45.290295 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 31 | 285 | 45.290295 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 37 | 60 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 152 | 164 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 37 | 60 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 152 | 164 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 598 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 598 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 384 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04810.1 | NIMA-related kinase 2. Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_021857265.1 | serine/threonine-protein kinase Nek3-like [Spinacia oleracea] | 0 |
| Q9CAU7 | Serine/threonine-protein kinase Nek2 OS=Arabidopsis thaliana OX=3702 GN=NEK2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RYR2 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_013760 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology