Basic Information
Locus ID:
Lb4G23052
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 56727023 | 56738738 | - | Lb4G23052 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 123,135.59 Da | 48.68 | 83.67 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 855 | 1092 | 3.4254E-117 | - |
| CDD | cd13999 | STKc_MAP3K-like | 855 | 1092 | 3.4254E-117 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 849 | 1092 | 3.2E-59 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 849 | 1092 | 3.2E-59 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 469 | 677 | 4.1E-72 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 469 | 677 | 4.1E-72 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 834 | 1092 | 1.75E-77 | IPR011009 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 75 | 154 | 2.16E-7 | IPR038765 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 834 | 1092 | 1.75E-77 | IPR011009 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 75 | 154 | 2.16E-7 | IPR038765 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 928 | 1105 | 3.2E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 842 | 926 | 1.1E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 928 | 1105 | 3.2E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 842 | 926 | 1.1E-34 | - |
| SMART | SM00220 | serkin_6 | 849 | 1096 | 1.2E-54 | IPR000719 |
| SMART | SM00220 | serkin_6 | 849 | 1096 | 1.2E-54 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 849 | 1096 | 42.604836 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 849 | 1096 | 42.604836 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 970 | 982 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 855 | 876 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 855 | 876 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 970 | 982 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 0 |
| RefSeq | XP_034676089.1 | serine/threonine-protein kinase CTR1 [Vitis riparia] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | E0CRX8 | Protein kinase domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g07700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology