Basic Information
Locus ID:
Lb4G22963
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 54005281 | 54010541 | - | Lb4G22963 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 75,819.12 Da | 37.37 | 94.75 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 407 | 678 | 3.99681E-89 | - |
| CDD | cd14066 | STKc_IRAK | 407 | 678 | 3.99681E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 402 | 674 | 3.7E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 157 | 199 | 2.0E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 94 | 151 | 3.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 67 | 1.6E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 94 | 151 | 3.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 67 | 1.6E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 402 | 674 | 3.7E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 157 | 199 | 2.0E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 233 | 7.37E-36 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 233 | 7.37E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 380 | 675 | 6.01E-77 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 380 | 675 | 6.01E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 245 | 1.7E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 364 | 478 | 1.5E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 702 | 1.4E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 245 | 1.7E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 364 | 478 | 1.5E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 702 | 1.4E-58 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 401 | 678 | 37.445927 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 401 | 678 | 37.445927 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 94 | 115 | 7.396226 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 94 | 115 | 7.396226 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 284 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 284 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 284 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 284 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_009357210.2 | protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X2 [Pyrus x bretschneideri] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5FRK2 | Protein STRUBBELIG-RECEPTOR FAMILY 8-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_001899 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology